MycorrhizaeV1, Main, Exploration, bibRecord, 001381

Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the High Arctic.

Identifieur interne : 001381 ( Main/Exploration ); précédent : 001380; suivant : 001382

Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the High Arctic.

Auteurs : Sunil Mundra [Norvège] ; Mohammad Bahram [Estonie, Suède] ; Leho Tedersoo [Estonie] ; H Vard Kauserud [Norvège] ; Rune Halvorsen [Norvège] ; Pernille Bronken Eidesen [Norvège]

Source :

Molecular ecology [ 1365-294X ] ; 2015.

RBID : pubmed:26547806

Descripteurs français

KwdFr :
- ADN fongique (MeSH), Analyse de séquence d'ADN (MeSH), Biodiversité (MeSH), Microbiologie du sol (MeSH), Mycorhizes (classification), Mycorhizes (génétique), Polygonaceae (microbiologie), Racines de plante (microbiologie), Régions arctiques (MeSH), Saisons (MeSH), Séquençage nucléotidique à haut débit (MeSH).
MESH :
- génétique : Mycorhizes.
- microbiologie : Polygonaceae, Racines de plante.
- ADN fongique, Analyse de séquence d'ADN, Biodiversité, Microbiologie du sol, Mycorhizes, Régions arctiques, Saisons, Séquençage nucléotidique à haut débit.

English descriptors

KwdEn :
- Arctic Regions (MeSH), Biodiversity (MeSH), DNA, Fungal (MeSH), High-Throughput Nucleotide Sequencing (MeSH), Mycorrhizae (classification), Mycorrhizae (genetics), Plant Roots (microbiology), Polygonaceae (microbiology), Seasons (MeSH), Sequence Analysis, DNA (MeSH), Soil Microbiology (MeSH).
MESH :
- chemical : DNA, Fungal.
- geographic : Arctic Regions.
- classification : Mycorrhizae.
- genetics : Mycorrhizae.
- microbiology : Plant Roots, Polygonaceae.
- Biodiversity, High-Throughput Nucleotide Sequencing, Seasons, Sequence Analysis, DNA, Soil Microbiology.

Abstract

Ectomycorrhizal (ECM) fungi are important for efficient nutrient uptake of several widespread arctic plant species. Knowledge of temporal variation of ECM fungi, and the relationship of these patterns to environmental variables, is essential to understand energy and nutrient cycling in Arctic ecosystems. We sampled roots of Bistorta vivipara ten times over two years; three times during the growing-season (June, July and September) and twice during winter (November and April) of both years. We found 668 ECM OTUs belonging to 25 different ECM lineages, whereof 157 OTUs persisted throughout all sampling time-points. Overall, ECM fungal richness peaked in winter and species belonging to Cortinarius, Serendipita and Sebacina were more frequent in winter than during summer. Structure of ECM fungal communities was primarily affected by spatial factors. However, after accounting for spatial effects, significant seasonal variation was evident revealing correspondence with seasonal changes in environmental conditions. We demonstrate that arctic ECM richness and community structure differ between summer (growing-season) and winter, possibly due to reduced activity of the core community, and addition of fungi adapted for winter conditions forming a winter-active fungal community. Significant month × year interactions were observed both for fungal richness and community composition, indicating unpredictable between-year variation. Our study indicates that addressing seasonal changes requires replication over several years.

DOI: 10.1111/mec.13458
PubMed: 26547806

Affiliations:

Links toward previous steps (curation, corpus...)

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Le document en format XML

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<term>High-Throughput Nucleotide Sequencing (MeSH)</term>
<term>Mycorrhizae (classification)</term>
<term>Mycorrhizae (genetics)</term>
<term>Plant Roots (microbiology)</term>
<term>Polygonaceae (microbiology)</term>
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<term>Analyse de séquence d'ADN (MeSH)</term>
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<term>Mycorhizes (classification)</term>
<term>Mycorhizes (génétique)</term>
<term>Polygonaceae (microbiologie)</term>
<term>Racines de plante (microbiologie)</term>
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<term>Séquençage nucléotidique à haut débit (MeSH)</term>
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<front><div type="abstract" xml:lang="en">Ectomycorrhizal (ECM) fungi are important for efficient nutrient uptake of several widespread arctic plant species. Knowledge of temporal variation of ECM fungi, and the relationship of these patterns to environmental variables, is essential to understand energy and nutrient cycling in Arctic ecosystems. We sampled roots of Bistorta vivipara ten times over two years; three times during the growing-season (June, July and September) and twice during winter (November and April) of both years. We found 668 ECM OTUs belonging to 25 different ECM lineages, whereof 157 OTUs persisted throughout all sampling time-points. Overall, ECM fungal richness peaked in winter and species belonging to Cortinarius, Serendipita and Sebacina were more frequent in winter than during summer. Structure of ECM fungal communities was primarily affected by spatial factors. However, after accounting for spatial effects, significant seasonal variation was evident revealing correspondence with seasonal changes in environmental conditions. We demonstrate that arctic ECM richness and community structure differ between summer (growing-season) and winter, possibly due to reduced activity of the core community, and addition of fungi adapted for winter conditions forming a winter-active fungal community. Significant month × year interactions were observed both for fungal richness and community composition, indicating unpredictable between-year variation. Our study indicates that addressing seasonal changes requires replication over several years.</div>
</front>
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<Abstract><AbstractText>Ectomycorrhizal (ECM) fungi are important for efficient nutrient uptake of several widespread arctic plant species. Knowledge of temporal variation of ECM fungi, and the relationship of these patterns to environmental variables, is essential to understand energy and nutrient cycling in Arctic ecosystems. We sampled roots of Bistorta vivipara ten times over two years; three times during the growing-season (June, July and September) and twice during winter (November and April) of both years. We found 668 ECM OTUs belonging to 25 different ECM lineages, whereof 157 OTUs persisted throughout all sampling time-points. Overall, ECM fungal richness peaked in winter and species belonging to Cortinarius, Serendipita and Sebacina were more frequent in winter than during summer. Structure of ECM fungal communities was primarily affected by spatial factors. However, after accounting for spatial effects, significant seasonal variation was evident revealing correspondence with seasonal changes in environmental conditions. We demonstrate that arctic ECM richness and community structure differ between summer (growing-season) and winter, possibly due to reduced activity of the core community, and addition of fungi adapted for winter conditions forming a winter-active fungal community. Significant month × year interactions were observed both for fungal richness and community composition, indicating unpredictable between-year variation. Our study indicates that addressing seasonal changes requires replication over several years.</AbstractText>
<CopyrightInformation>© 2015 John Wiley & Sons Ltd.</CopyrightInformation>
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<ForeName>Sunil</ForeName>
<Initials>S</Initials>
<AffiliationInfo><Affiliation>The University Centre in Svalbard, P.O. Box 156, Longyearbyen, NO-9171, Norway.</Affiliation>
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<AffiliationInfo><Affiliation>Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, Oslo, NO-0316, Norway.</Affiliation>
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<AffiliationInfo><Affiliation>Institute of Ecology and Earth Sciences, Tartu University, 14A Ravila, Tartu, 50411, Estonia.</Affiliation>
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<AffiliationInfo><Affiliation>Department of Organismal Biology, Evolutionary Biology Centre, Uppsala University, Uppsala, SE 75236, Sweden.</Affiliation>
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<ForeName>Håvard</ForeName>
<Initials>H</Initials>
<AffiliationInfo><Affiliation>Section for Genetics and Evolutionary Biology, Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, Oslo, NO-0316, Norway.</Affiliation>
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<ForeName>Rune</ForeName>
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<ForeName>Pernille Bronken</ForeName>
<Initials>PB</Initials>
<AffiliationInfo><Affiliation>The University Centre in Svalbard, P.O. Box 156, Longyearbyen, NO-9171, Norway.</Affiliation>
</AffiliationInfo>
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<MeshHeading><DescriptorName UI="D059014" MajorTopicYN="N">High-Throughput Nucleotide Sequencing</DescriptorName>
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<MeshHeading><DescriptorName UI="D038821" MajorTopicYN="N">Mycorrhizae</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="Y">classification</QualifierName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
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<MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName>
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<MeshHeading><DescriptorName UI="D019664" MajorTopicYN="N">Polygonaceae</DescriptorName>
<QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012621" MajorTopicYN="Y">Seasons</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D017422" MajorTopicYN="N">Sequence Analysis, DNA</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D012988" MajorTopicYN="Y">Soil Microbiology</DescriptorName>
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<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Arctic</Keyword>
<Keyword MajorTopicYN="Y">Bistorta vivipara</Keyword>
<Keyword MajorTopicYN="Y">Illumina sequencing</Keyword>
<Keyword MajorTopicYN="Y">Svalbard</Keyword>
<Keyword MajorTopicYN="Y">ectomycorrhizal fungi</Keyword>
<Keyword MajorTopicYN="Y">fungal richness and community</Keyword>
<Keyword MajorTopicYN="Y">metagenomics/community genomics</Keyword>
<Keyword MajorTopicYN="Y">seasonal/temporal variation</Keyword>
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<Month>04</Month>
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<Month>10</Month>
<Day>31</Day>
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<PubMedPubDate PubStatus="accepted"><Year>2015</Year>
<Month>11</Month>
<Day>03</Day>
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<PubMedPubDate PubStatus="entrez"><Year>2015</Year>
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Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the High Arctic.

Temporal variation of Bistorta vivipara-associated ectomycorrhizal fungal communities in the High Arctic.

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